We assess Holocene environmental change at alpine Lake Njulla (68degrees22'N, 18degrees42'E, 999 m a.s.l.) in northernmost Sweden using sedimentary remains of chironomid head capsules and diatoms. We apply regional calibration sets to quantitatively reconstruct mean July air temperature (using chironomids and diatoms) and lake-water pH (using diatoms). Both chironomids and diatoms infer highest temperatures (1.7-2.3degreesC above present-day estimates, including, a correction for glacio-isostatic land up-lift by 0.6degreesC) during the early Holocene (c. 9,500-8,500 cal. yrs BP). Diatoms suggest a decreasing lake-water pH trend (c. 0.6 pH units) since the early Holocene. Using detrended canonical correspondence analysis (DCCA), we compare the Holocene development of diatom communities in Lake Njulla with four other nearby lakes (Lake 850, Lake Tibetanus, Vuoskkujavri, Vuolep Njakajaure) located along an altitudinal gradient. All five lakes show similar initial DCCA scores after deglaciation, suggesting that similar environmental processes such as high erosion rates and low light availability associated with high summer temperature appear to have regulated the diatom community, favouring high abundances of Fragilaria species. Subsequently, the diatom assemblages develop in a directional manner, but timing and scale of development differ substantially between lakes. This is attributed primarily to differences in the local geology, which is controlling the lake-water pH. Imposed on the basic geological setting, site-specific processes such as vegetation development, climate, hydrological setting and in-lake processes appear to control lake development in northern Sweden.